BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C09SP1|AL430201
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig97 1214 0.0
>3x_Contig97
Length = 1378
Score = 1214 bits (609), Expect = 0.0
Identities = 638/651 (98%), Gaps = 1/651 (0%)
Strand = Plus / Minus
Query: 6 gctgaggaaccaccaactgcttcgataattctagtaggtaagctatctatatcactggca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gctgaggaaccaccaactgcttcgataattctagtaggtaagctatctatatcactggca 608
Query: 66 gcccttgtaagatggacggcacggccaattctccakkagttanatatgggattaaaaata 125
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 607 gcccttgtaagatggacggcacggccaattctccatgagttagatatgggattaaaaata 548
Query: 126 ntttcatttctcatttcatcacaggtcatagacggctcaacgacagcacattgaacaccg 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtttcatttctcatttcatcacaggtcatagacggctcaacgacagcacattgaacaccg 488
Query: 186 tggttgtacattgcgtcacgtattacatcctccatttgtacgtcatcttcagaagaartg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 487 tggttgtacattgcgtcacgtattacatcctccatttgtacgtcatcttcagaagaagtg 428
Query: 246 ataarcattgacattccattaccatcggatagtkagacatatggatagccgtgcaaat-c 304
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 427 ataagcattgacattccattaccatcggatagtgagacatatggatagccgtgcaaatgc 368
Query: 305 gtgaacaacggagggtaaactttrccatttttttggataggctctgcccattaaatccaa 364
|||||| |||||||||||||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 367 gtgaacgacggagggtaaactttgccattgtgttggataggctctgcccattaaatccaa 308
Query: 365 atcaacacatggtagacccattttaaaggcggtccaaataccagacaacccattaccacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atcaacacatggtagacccattttaaaggcggtccaaataccagacaacccattaccacc 248
Query: 425 acctatctcaaacatgaaaataccatctgtttttttgccctcccatctttcgatgaggga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 acctatctcaaacatgaaaataccatctgtttttttgccctcccatctttcgatgaggga 188
Query: 485 aacagcttcgatcatttccgatccatgtaatctttcactcgatattactggagaaccaca 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 187 aacagcttcgatcatttccgatccatgtaatctttcactcgatataactggagaaccaca 128
Query: 545 ataaccgacatttatagcggtaccttttccctctgtctttctctcaaattcatccaatgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ataaccgacatttatagcggtaccttttccctctgtctttctctcaaattcatccaatgt 68
Query: 605 tacaatccttagtttaccaccttgtttgataattctttttaattcaatact 655
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tacaatccttagtttaccaccttgtttgataattctttttaattcaatact 17
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6383
Number of Sequences: 1807
Number of extensions: 6383
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)